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Accession Number |
TCMCG016C07286 |
gbkey |
CDS |
Protein Id |
OMO89431.1 |
Location |
join(47834..48361,48932..50796,51171..51321,51647..52494,54299..54594,54837..55015) |
Organism |
Corchorus capsularis |
locus_tag |
CCACVL1_07842 |
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Length |
1288aa |
Molecule type |
protein |
Topology |
linear |
Data_file_division |
PLN |
dblink |
BioProject:PRJNA215142; BioSample:SAMN03290679; |
db_source |
AWWV01008701.1
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Definition |
RNA-dependent RNA polymerase, eukaryotic-type [Corchorus capsularis] |
Locus_tag |
CCACVL1_07842
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CDS: ATGGGCAAGACAATTAAGCTCTTTGGGTTTGCTTCTGCTGTATCTCAAGAAGAAGTGATAGAGTTTCTGGAGGAATATATAGGGAAAGGAACCATTGAGGCTGTAAAAGTTGGGCAGTCTAAAAGGGAAGGCTCAAGAGCTCATGCCAAAGTTCAGTTCAAAACCGAAGAAGATGCTGAAAGAATCTTGTCCTGGACTGCTGATCGAGCTCTGTGGCACAAGAGTTCTTATCTGAGAGCATGGACTCTGAAGCATGACATTATCCCACAACCAAAGTCACAATCATTCAATCTGCAAAGCATAGACAATTTGATGTTGCACATTGGATGTCAGGTTTCGAGCGAAAGGTTTTATGTCCTCTGGAAACATGGTGATGTCTCCATGAAGTTTGGCTTGAAACTGGACAGATTATACTTTTTTCTAACGTATAATTCTGTAGATTACAAGCTTGAGTTGTTCGACGACAATGTTTGGCAGATTATGCTGCATTATCCCCTCGATAAAACTAGGAAGTTCCTTATCATTCAGTTACTTGGGGCTCCTCGGATTTATGAGAAAGATGCATCTATTCCCATCTCTTCTAAGGAAGTTCCAGATGATGATCAGTGGATCAGGGAAGTTGATTTTACTCCAGGCAATTGCATTGGTCAATCTTTTGGTTTATGTCTAGAGCTTCCTCGAGGAGTTAAACTCCCAAAATTTGATCAGAATTTTTATTATAAGAAAGTTGAAGACAAATTCTCTCTAGAGAAGGGTTCTGTCTTTTCTTCCAACCCTGTTCTTGTCCCTATAATAGTTCCACCTCAAGGTTTTGACTTGCCCTATAGTATCTTGTTCAAAGTGAATTCCTTGGTCCAACATGGTTGTCTTCCTGTGCCAACTCTTGATGCCAATTTCTTTAAATTGGTTGATCCAAGTAGAATCAATACTGCATTCATAGAACATGCATTAGAGAAGCTGTATAGCTTCAGAGAATGTTGCTATGAACCTGTGAAGTGGCTAGATGAGCAGTATAAGAAATACCGTGAGTCAGAAAAGCCTCCTAGACCTCTTCTTGTCGCCTTTGATAATGGATTAGTTACCATTAGAAGGGCTCAGGTGACCCCATCTAAGGTGTACTTTAGTGGTCCAGAGGTGAATCTTTCAAACCGTGTGCTGCGTAATTACATTAACGACATTGATAATTTTCTTCGTGTTTCTTTTGTTGATGAGGAACTTGGGAAGATACGCTCAACAGATTTGTCTTCAAGCACATCTGTTACAAGTGATGGAAAGCGCACTAAGATTTATGATAGGATATTATCAACTCTTAAAAATGGTTTAGTCATTGGTGATAAGAAATTTGAGTTTCTTGCTTGTTCAACTAGTCAGTTACGAGAGAACTCCATTTGGATGTTTGCTTCAAAACCTGGACTTACTGCAGTGGATATCAGAGAGAAAATGGGTCATATTCATGTCATTAGGAATGTGGCAAAATATGCTGCCAGGTTAGGTCAGTCTCTAAGTTCATCTCGGGAAACTTTAGAAGTGAAGATGAATGAAATTGAAATCATTCCTGACATTGATGGTGGAACTAAGTACAATTTCTCTGATGGCATTGGGAAAATATCTGCAAAACTTGCAAAGGCAGTGGCTAAGAAATGTGGTTTGAGAACTTACACTCCATCAGCATTTCAAATTCGGTATGGTGGTTACAAAGGAGTTGTAGCTGTTGATCCAACATCTTCAGTAAAGTTGTCGTTGAGAAAGAGTATGCGGAAGTTTGATGCAGACAGTACTAGTCTTGATGTTTTATCATGGAGCAAAAAGCACCCTTGTTATCTTAATCGCCAAATAATCATCCTTTTGTCTACTCTTGGGGTTGAAGATATTGTTTTCGAAAAGAAGCAGAAAGAGGTTATAGGTCAACTGGATGCAATTTTGATGGATCCGGAAAGAGCAAAGGAGGCAATGGAGTGGATATCTCATGGAGAAATTACCAATGTTCTAAGAGAAATGCTTATGTGTGGTTACAACCCGGATTCAGAACCATTTCTGTCAATGATGCTACGGACAATTCGTGCATCAAAATTGCTGGATTTGAGGACCAAAACAAGGATTTTTGTCGAAAATGGAAGATCTATGATGGGATGTCTAGATGAAACTGGGACATTAGAGTATGGCCAGGTGTTTGTGCAGTGCTCTGGCCTTAAACCGAGGCAATTCCCTGACGACTCCCTCTTGACATTCAGTAATGGTAGGGTAAATCAAAATTGCCATGTTGTTGAAGGGACGATTGTTGTTGCCAAGAACCCTTGTTTACACCCTGGAGACGTACGAGTTCTGAAGGCTGTCAATGCCGTTGTTCTGCATCACATAGTGGATTGCATTGTTTTTCCACAAAAAGGCCAAAGACCTCATCCAAATGAATGCTCGGGTAGTGATCTGGATGGCGATATGTACTTTGTTTCTTGGGATGAAGATCTCATTCCTCCCTGCCGGTTTCCACCCATGGACTATGATCCAGCAGCAAGTACCCTTTTGGATCATGATGTAACCATTGAGGAGGTTGCAGAGTATTTTACCAACTACATACTCAATGACAGCTTGGGAATCATTTCTAATGCCCACACAGCGTTCGCAGATAAAGAACCAACTAAGGCATTGAGTGAGGAATGCATTGAACTTGCCAAGTTATCATCCATTGCAGTTGACTTCCCCAAAACTGGTATTCCTGCAAAGATACCCCATCGTCTTCGCGTCCAACAATATCCAGATTTCATGGAAAAGCCTGAGAAGTTCACTTATGAATCACAAAGTGTGATCGGAAAGCTTTACCGTGAGGTGAAAGCAATAGCAACAGGGGTGAGTGATGCAAAACATTTCACCATGGAAGTAGCAGAGCAATCCTATGACTTTGACATGGAAGTTGATGGCTTCTTGGATTATGTCAACGATGCTTCTCATCACAAAAGTGTGTATGACAACAAACTTGCCAACCTGATGCGTTATTATGGGGTTAAAACTGAGGCTGAAATGATGAGTGGATGCATCATGAAAATGTCGAAATCTTTCGACAGAAGAAGAGACTTGGAAACAGTTGTTCTAGCTGTGAAATCATTGAGGAAAGAAGCTAGAGGCTGGTTTTATGAGAAAGGAGATAATGATGAGTTAGAATATTCCAACGTTGTCGGTGGCAATGTATTAGCAAAAGCTTCAGCTTGGTATCATGTAACATACCATCCAAACTTCTGGGGTTGCTACAATGATACACCTGATCTAGAGCATTTCATCAGCTTTCCATGGTGTATATATGACAAACTAATCCAAATTAAGAAGGAAAACAGTAGCAAAAAGTCTTCATTTGAAGGTCAAGCCAATAGAGGTGATGGGGTGCATCAGAAAACTAGTTGTGCTTCTGTTTCGTTGTCAAGTACAATAGATGATGGTCAGTTTGCAGAGAGAAATGATAGTGATCTTAGCCTTCCATCAGTGGGAATTGATAATGATTCATCAGATTTTCAAGTTAACAGAGGGAATGTGATTTTCTCAAGAACAGTAGTTGGTCTTGATGGTAGTGTTGTTTCAACTATAACTTCAAGTGTAATATGTTCTGATATTTCTAATAACAGTCAGAATAGATTTGATGGTACTATTCGGAACAGAATTGATGGAAACTCTTCCAACATGGTTGGAGAAAATTCTGCAGGCGTTTTAAGTTTGTTGGATGAGCAACAAACCGTTCAGAATCTTTCAGCTTTGGACAGTTCACTTCAATCTGATTTAAATGTGGAAGTTATTCCAATTTTGGAAAGTGAAGAAGAAATACTTCAATCTAACTTGAGTGAGTATATTCATTTTACAGTAGTTTTGTTTTTTTCTTATTAG |
Protein: MGKTIKLFGFASAVSQEEVIEFLEEYIGKGTIEAVKVGQSKREGSRAHAKVQFKTEEDAERILSWTADRALWHKSSYLRAWTLKHDIIPQPKSQSFNLQSIDNLMLHIGCQVSSERFYVLWKHGDVSMKFGLKLDRLYFFLTYNSVDYKLELFDDNVWQIMLHYPLDKTRKFLIIQLLGAPRIYEKDASIPISSKEVPDDDQWIREVDFTPGNCIGQSFGLCLELPRGVKLPKFDQNFYYKKVEDKFSLEKGSVFSSNPVLVPIIVPPQGFDLPYSILFKVNSLVQHGCLPVPTLDANFFKLVDPSRINTAFIEHALEKLYSFRECCYEPVKWLDEQYKKYRESEKPPRPLLVAFDNGLVTIRRAQVTPSKVYFSGPEVNLSNRVLRNYINDIDNFLRVSFVDEELGKIRSTDLSSSTSVTSDGKRTKIYDRILSTLKNGLVIGDKKFEFLACSTSQLRENSIWMFASKPGLTAVDIREKMGHIHVIRNVAKYAARLGQSLSSSRETLEVKMNEIEIIPDIDGGTKYNFSDGIGKISAKLAKAVAKKCGLRTYTPSAFQIRYGGYKGVVAVDPTSSVKLSLRKSMRKFDADSTSLDVLSWSKKHPCYLNRQIIILLSTLGVEDIVFEKKQKEVIGQLDAILMDPERAKEAMEWISHGEITNVLREMLMCGYNPDSEPFLSMMLRTIRASKLLDLRTKTRIFVENGRSMMGCLDETGTLEYGQVFVQCSGLKPRQFPDDSLLTFSNGRVNQNCHVVEGTIVVAKNPCLHPGDVRVLKAVNAVVLHHIVDCIVFPQKGQRPHPNECSGSDLDGDMYFVSWDEDLIPPCRFPPMDYDPAASTLLDHDVTIEEVAEYFTNYILNDSLGIISNAHTAFADKEPTKALSEECIELAKLSSIAVDFPKTGIPAKIPHRLRVQQYPDFMEKPEKFTYESQSVIGKLYREVKAIATGVSDAKHFTMEVAEQSYDFDMEVDGFLDYVNDASHHKSVYDNKLANLMRYYGVKTEAEMMSGCIMKMSKSFDRRRDLETVVLAVKSLRKEARGWFYEKGDNDELEYSNVVGGNVLAKASAWYHVTYHPNFWGCYNDTPDLEHFISFPWCIYDKLIQIKKENSSKKSSFEGQANRGDGVHQKTSCASVSLSSTIDDGQFAERNDSDLSLPSVGIDNDSSDFQVNRGNVIFSRTVVGLDGSVVSTITSSVICSDISNNSQNRFDGTIRNRIDGNSSNMVGENSAGVLSLLDEQQTVQNLSALDSSLQSDLNVEVIPILESEEEILQSNLSEYIHFTVVLFFSY |